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Associations between cytokine gene polymorphisms and rheumatoid arthritis in Turkish population     
Yazarlar
Burcu Yücel
İstanbul Medeniyet Üniversitesi, Türkiye
Ceren Sümer
Türkiye
Prof. Dr. İlhami GÖK Prof. Dr. İlhami GÖK
Kafkas Üniversitesi, Türkiye
Murat Karkucak
Karadeniz Teknik Üniversitesi, Türkiye
Emel Alemdaroğlu
Türkiye
Fahri Uçar
Akdeniz Üniversitesi, Türkiye
Özet
Various cytokine polymorphisms have been associated with genetic risk factors predisposing to Rheumatoid Arthritis (RA) in different populations. To predict the clinical outcome as well as response to therapy in RA, studies aimed to describe genetic markers. The present study aims to search for polymorphisms of 13 cytokine coding genes in the Eastern Black Sea Region of Turkey. DNAs of 49 patients and 96 healthy bone marrow and kidney donors were isolated from peripheral blood samples. Genotyping was performed using the Heidelberg Cytokine Typing Tray kit. PCR products were visualized on an agarose gel, and results were analyzed using the interpretation scheme provided with the kit. Arlequin 3.5 software was used for statistical analysis. No positive association was found between allele frequencies and the disease. However, a negative association was found for the IL-A -889 C allele (p=0.02, OR=0.533, Wald's 95% CI=0.318-0.893). IL-12 -1188 CC (p=0.01, OR=3.667, Wald's 95% CI=1.246-10.786), IL-4 -1098 GT (p=0.02, OR=2.405, Wald's 95% CI=1.129-5.125) genotypes were found positively associated with the RA, while IL-4 -590 CT (p=0.02, OR=0.422, Wald's 95% CI=0.201-0.886) was found negatively associated with the disease. In addition, IL-6 GG haplotype was found positively associated with the RA (p=0.02, OR=1.880, Wald's 95% CI=1.086-3.254). Our findings suggest that some polymorphisms of the IL-1A, IL-2, IL-4, IL-6 and IL-12 could be responsible for the susceptibility or protective to RA in our study population. Multi-centered and large numbers of subjects containing studies that search for cytokine polymorphisms will gather more information regarding the susceptibility to RA of Turkish patients.
Anahtar Kelimeler
Cytokine polymorphism | PCR-SSP | rheumatoid arthritis
Makale Türü Özgün Makale
Makale Alt Türü SSCI, AHCI, SCI, SCI-Exp dergilerinde yayımlanan tam makale
Dergi Adı NORTHERN CLINICS OF ISTANBUL
Dergi ISSN 2148-4902
Dergi Tarandığı Indeksler SCI-Expanded
Dergi Grubu Q3
Makale Dili İngilizce
Basım Tarihi 01-2020
Cilt No 7
Sayı 6
Sayfalar 563 / 571
Doi Numarası 10.14744/nci.2020.70845
Makale Linki http://www.nclin.ist/jvi.aspx?un=NCI-70845volume=